fascicle.plot

fascicle.plot(axes, contour_color='k', myel_color='r', unmyel_color='b', elec_color='gold', num=False)[source]

plot the fascicle in the Y-Z plane (transverse section)

Parameters:

  • axes (matplotlib.axes) – axes of the figure to display the fascicle

  • contour_color (str) – matplotlib color string applied to the contour. Black by default

  • myel_color (str) – matplotlib color string applied to the myelinated axons. Red by default

  • unmyel_color (str) – matplotlib color string applied to the myelinated axons. Blue by default

  • num (bool) – if True, the index of each axon is displayed on top of the circle